PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_00427.1_g00008.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 405aa    MW: 45297.3 Da    PI: 7.0129
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_00427.1_g00008.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.43.5e-09260310555
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                              kr +r+ +NReAA rs +RK  ++ eLe  v++L ++  +L  ele  k e
  Rsa1.0_00427.1_g00008.1 260 KRVKRLLSNREAAARSKERKALRQSELEIQVQTLYTQIAKLTAELELEKRE 310
                              999***************************************999876655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.3E-8253310No hitNo description
PfamPF077161.0E-7256309IPR004827Basic-leucine zipper domain
SMARTSM003383.2E-9256320IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.875258310IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.27E-8260311No hitNo description
CDDcd147031.71E-11261312No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MDGHADIPPS HSSGLSQYPT TYNPFGNGGD ERFNRATMLP PPSGSSLAPF PPCHQFQPTT  60
DQPSQYWSPN FIPGSSPSQQ QPLLSQQPPS SLFSLPPLSP SSLRYSQSAT VANKEMTPTL  120
HPCTQMLNSS SGSNLAHKRG SSDNFVSLLA AQNNQQIYPK PIEMPVGVRS SVRENAWSHE  180
DVNVDVSNGN KRRAGNEIAR PNRIWRSASA DSSLYAPPNP QGVSVDVGND IAYGGVFTAY  240
QLSKIAACDD LKKMAKTDPK RVKRLLSNRE AAARSKERKA LRQSELEIQV QTLYTQIAKL  300
TAELELEKRE RMAADDECVR MKILLGGGEE HAQVRDHELN NYLSGEVHRL TEEVSRQREE  360
MSRLREEVSE YRRKESERTN ANMLEQLNIN QQFQETPQQT NYNFE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_013716937.11e-127PREDICTED: transcription factor RF2a-like
TrEMBLA0A078EFP51e-130A0A078EFP5_BRANA; BnaC04g33660D protein
STRINGBra030312.1-P1e-116(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM1940967
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.34e-26bZIP family protein